i dont use SA... make sure however... that SA is on your whitelist (the ip... like 127.0.0.1)...
then make sure if you use windows firewall that SA is allowed. also i think you have to adjust the delay between messages... by default its like 10-15 seconds which is fine for SA... ours is set to 1 second since we do not use SA.
what you could try... is set zen, spamcop and all 3 uceprotects to 5... then if 5+5=10 flag as spam low... then have spam low go to junk folder. make sure bayensian is on... thats all we have and we only get a few messages a day but we dont regulate these accounts so... spam assassin might be helping hehe.
i'm not really sure from here on what to help you with. i have phrase lists but smartertools does not use them. -jer